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Download Software
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| File |
Size |
Description |
Deconvoluter
1.10
(2-26-05) |
158 kb |
The TMA-Deconvoluter. Converts raw scoring worksheets from
the 3-D TMA layout into a 2-D tabulated table format suitable for
further analysis.
|
Deconvoluter
Documentation
(2-26-05) |
2.78 Mb |
Downloadable version of the on-line documentation for the
Deconvoluter. Contents are very similar to the contents of this
website. PDF format.
|
Stainfinder
source code
(4-2-02) |
14 kb |
The source code for the CGI program Stainfinder (written in
PERL), required for setting up the on-line digital image collection
that will work in concert with TMA datasets viewed under TreeView.
|
Demo Suite
1.10 (zipped)
(2-26-05) |
141 kb |
The TMA Software Demo Suite. Contains the
TMA-Deconvoluter V. 1.10, two sample TMAs, their output files, and
their TreeView-compatible clustered files. Individual components may
be downloaded below.
Note: individual components may be updated more
frequently than this suite.
|
|
Downloadable components
of Demo Suite
|
Sample TMA 4
XLS,
TXT,
KM,
GTR,
ATR,
CDT
(3-30-02) |
132 kb
total |
The sample TMA-4 lymphoma array. Consists of the
following:
XLS = Raw scoring worksheet
TXT = Pre-cluster output file
KM = Output for Kaplan-Meier or other analysis
TreeView files:
GTR = Gene dendrogram
ATR = Array dendrogram
CDT = Clustered output
|
Sample TMA 5
XLS,
TXT,
KM,
GTR,
ATR,
CDT
(3-30-02) |
128 kb
total |
The sample TMA-5 breast array. Consists of the
following:
XLS = Raw scoring worksheet
TXT = Pre-cluster output file
KM = Output for Kaplan-Meier or other analysis
TreeView files:
GTR = Gene dendrogram
ATR = Array dendrogram
CDT = Clustered output
|
Lookup File
(3-30-02) |
142 kb |
The companion lookup file for the Demo Suite.
|
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Older Versions of the TMA-Deconvoluter
|
Version 1.08
(8-20-03) |
136kb to 160kb |
Earlier versions. It is highly recommended that you
download the latest version of the TMA-Deconvoluter to minimize problems resulting from bugs present
in earlier versions. Check the Revision History for details and for
information on which version is the earliest supported version. |
Version 1.07
(4-1-03) |
Version 1.06
(6-1-02) |
Version 1.05a
(4-26-02) |
Version 1.05
(4-22-02) |
Version 1.04
(4-7-02) |
Version 1.03
(3-15-02) |
Version 1.02
(3-5-02) |
Version 1.01
(2-8-02) |
Version 1.00
(5-28-01) |
